生物信息学相关操作(6)

2019-08-03 10:38

Template Seq Identity Description 3pfq.1.A67.29%

Protein kinase C beta type

Range 119 - 676

Coverage 0.95

Oligo-state monomer

Ligand Added to Model ANPCACACA

Method X-ray, 4.00 ?

Seq Similarity 0.52

Description

? - Binding site not conserved. PHOSPHOAMINOPHOSPHONIC ACID-AD... ? - Binding site not conserved. CALCIUM ION ? - Binding site not conserved. CALCIUM ION ? - Binding site not conserved. CALCIUM ION

ZNZN

? - Binding site not conserved. ZINC ION ? - Binding site not conserved. ZINC ION

Model-Template Alignment

Model_01 MSEGSDNNGDPQQQGAEGEAVGENKMKSRLRKGALKKKNVFNVKDHCFIA 50 3pfq.1.A ---------------------GEESTVRFARKGALRQKNVHEVKNHKFTA

42

Model_01 RFFKQPTFCSHCKDFICGYQSGYAWMGFGKQGFQCQVCSYVVHKRCHEYV 100 3pfq.1.A RFFKQPTFCSHCTDFI--------W-GFGKQGFQCQVCSFVVHKRCHEFV Model_01 TFICPGKDKGIDSDSPKTQHNFEPFTYAGPTFCDHCGSLLYGIYHQGLKC 3pfq.1.A TFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYGLIHQGMKC Model_01 SACDMNVHARCKENVPSLCGCDHTERRGRIYLEINVKENLLTVQIKEGRN

83 150 133 200

3pfq.1.A DTCMMNVHKRCVMNVPSLCGTDHTERRGRIYIQAHIDREVLIVVVRDAKN 183 Model_01 LIPMDPNGLSDPYVKVKLIPDDKDQSKKKTRTIKACLNPVWNETLTYDLK 3pfq.1.A LVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLK Model_01 PEDKDRRILIEVWDWDRTSRNDFMGALSFGISEIIKNPTNGWFKLLTQDE

250 233 300

3pfq.1.A ESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQEE 283 Model_01 GEYYNVPC----ADDEQDLLKLKQKPSQKKPMVMRSDTNTHTSSK-----

341

3pfq.1.A GEYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNG Model_01 -KDMIRATDFNFIKVLGKGSFGKVLLAERKGSEELYAIKILKKDVIIQDD 3pfq.1.A NRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDD Model_01 DVECTMIEKRVLALGEKPPFLVQLHSCFQTMDRLFFVMEYVNGGDLMFQI

333 390 383 440

3pfq.1.A DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI 433 Model_01 QQFGKFKEPVAVFYAAEIAAGLFFLHTKGILYRDLKLDNVLLDADGHVKI 3pfq.1.A QQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKI Model_01 ADFGMCKENIVGDKTTKTFCGTPDYIAPEIILYQPYGKSVDWWAYGVLLY

490 483 540

3pfq.1.A ADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLY 533 Model_01 EMLVGQPPFDGEDEEELFAAITDHNVSYPKSLSKEAKEACKGFLTKQPNK 3pfq.1.A EMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGK Model_01 RLGCGSSGEEDVRLHPFFRRIDWEKIENREVQPPFKPKIKHRKDVSNFDK 3pfq.1.A RLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASGR-NAENFDR Model_01 QFTSEKTDLTPTDKVFMMNLDQSEFVGFSYMNPEYVFSP 3pfq.1.A FFTRHPPVLTPPDQEVIRNIDQSEFEGFSFVNSEFL--- Click model image to view in 3D ?

Your browser does not support WebGL. You might want to try Chrome, Firefox, IE 11, or newer versions of Safari

If you are using a recent version of one of the above browsers, your graphic card might be blocked. Check the browser documentation for details View pv (WebGL) AstexViewer (Java) DetachResetpv DetachResetModel 01

590 583 640 632 679 668

Swiss Institute of Bioinformatics

Schwede Group Contact Us Terms of use

Back to the Top Export Alignment

FASTA formatClustal FormatPNG Image

Alignment Options

Fade Mismatches Secondary Structure

None

DSSP

PSIPRED

SSpro

Colour Scheme

ClustalCysteine

No Colour

FASTAHydrophobicAliphatic

SizeChargedQMean4

PolarIndels

ProlineChain

Ser/ThrRainbow

Aromatic

PNG 窗体顶端 窗体底端

由于我的网页模式不支持查看结构图,所以下软件可视,有swiss pdb viewer可看之:


生物信息学相关操作(6).doc 将本文的Word文档下载到电脑 下载失败或者文档不完整,请联系客服人员解决!

下一篇:开封市行之教育 - 图文

相关阅读
本类排行
× 注册会员免费下载(下载后可以自由复制和排版)

马上注册会员

注:下载文档有可能“只有目录或者内容不全”等情况,请下载之前注意辨别,如果您已付费且无法下载或内容有问题,请联系我们协助你处理。
微信: QQ: